featurecounts-counting
Count reads per gene from aligned BAM files using Subread featureCounts. Use when processing BAM files from STAR/HISAT2 to generate gene-level counts for DESeq2/edgeR.
Also installable via skills CLI
npx skills add GPTomics/bioSkills/rna-quantification/featurecounts-counting
Source
Path:
rna-quantification/featurecounts-counting/SKILL.md(main)