umi-processing
Extract, process, and deduplicate reads using Unique Molecular Identifiers (UMIs) with umi_tools. Use when library prep includes UMIs and accurate molecule counting is needed, such as in single-cell R
Also installable via skills CLI
npx skills add mdbabumiamssm/LLMs-Universal-Life-Science-and-Clinical-Skills-/Skills/NGS_QC/read-qc/umi-processing
Source
Path:
Skills/NGS_QC/read-qc/umi-processing(main)