83,201 skills sorted by stars.
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Use AgentPMT external API to run the Binary To/From File Converter tool with wallet signatures, credits purchase, or cre...
End-to-end binder design using BindCraft hallucination. Use this skill when: (1) Designing protein binders with built-in...
Guidance for choosing the right protein binder design tool. Use this skill when: (1) Deciding between BoltzGen, BindCraf...
Guidance for SPR and BLI binding characterization experiments. Use when: (1) Planning binding kinetics experiments, (2)...
Binds enum values to WPF CommandParameter using x:Static markup extension. Use when passing enum types to commands or av...
Annotate CLIP-seq binding sites to genomic features including 3'UTR, 5'UTR, CDS, introns, and ncRNAs. Use when character...
Query BindingDB for measured drug-target binding affinities (Ki, Kd, IC50, EC50). Search by target (UniProt ID), compoun...
This skill should be used when the user asks to "fetch FFI bindings", "update zx.rs", "update zx.h", "update zx.zig", "g...
Complete guide for CloudBase Auth v2 using Web SDK (@cloudbase/js-sdk@2.x) - all login flows, user management, captcha h...
Use CloudBase HTTP API to access CloudBase platform features (database, authentication, cloud functions, cloud hosting,...
Analyze MSBuild binary logs to diagnose build failures by replaying binlogs to searchable text logs. Only activate in MS...
Generate MSBuild binary logs (binlogs) for build diagnostics and analysis. Only activate in MSBuild/.NET build context....
Functional annotation and taxonomy inference from sequence homology.
Assemble genomes/metagenomes and produce assembly QC artifacts.
Convert raw Nanopore signal data (FAST5/POD5) to nucleotide sequences using Dorado basecaller. Covers model selection, G...
Perform metagenomic binning, refinement, and QC with completeness/contamination checks.
Extract, filter, annotate, and export differential expression results from DESeq2 or edgeR. Use for identifying signific...
Navigate between NCBI databases using Biopython's Entrez module (ELink utility).
Initialize a bioinformatics project scaffold with reproducible environments, schemas, and data cataloging. Use for new p...
Call genes and annotate basic features for prokaryotes, viruses, and eukaryotes.
Create a Linktree-style bio link hub page as a single self-contained HTML file. Triggers on: "create a bio link page", "...
Run BLAST searches locally using NCBI BLAST+ command-line tools.
Evaluates scientific research rigor using systematic frameworks. Assesses methodology, statistics, biases, and evidence...
Meta-agent that routes bioinformatics requests to specialised sub-skills. Handles file type detection, analysis planning...
Build marker gene alignments and phylogenetic trees.
Designs and scaffolds bioinformatics pipelines using Prefect (Python) with Dask for local/distributed task execution and...
Cluster proteins into orthogroups and derive pangenome matrices.
Ingest, QC, and map reads with reproducible outputs. Use for raw read processing and coverage stats.
RNA-seq specific quality control including rRNA contamination detection, strandedness verification, gene body coverage,...
Assesses RNA-seq data quality for splicing analysis including junction saturation curves, splice site strength scoring,...
Aggregate results, train ML models, and produce reports with validated references.
Structure prediction and structure-based annotation.
View, query, and understand VCF/BCF variant files using bcftools and cyvcf2. Use when inspecting variants, extracting sp...
Detect, classify, and QC viral contigs.
Generate reproducible bioinformatics/data-science Methods + run documentation from workflow run artifacts (Nextflow/Snak...
Set up and execute phylogenetic biogeographic analyses using BioGeoBEARS in R. Use when users request biogeographic reco...
Carbon, nitrogen, phosphorus, sulfur, and water cycles — pools, fluxes, residence times, and anthropogenic perturbations...
Use when implementing data analysis pipelines, statistical tests, or bioinformatics workflows in code (Python/R), partic...
Expert-level biology, biotechnology, genetics, bioinformatics, and computational biology
Analyzes living systems and biological phenomena through biological lens using evolution, molecular biology, ecology, an...
Use when evaluating biological relevance, methodological appropriateness, or scientific validity of bioinformatics appro...
Extract biology entities from narrative text. Use when analyzing ecosystems, food chains, migration, hibernation, reprod...
Ralph-Inspired Adaptive Learning Framework for iterative, quality-gated biomarker report analysis
Open source biomedical Model Context Protocol (MCP) toolkit for connecting LLMs to biomedical data sources (PubMed, Clin...