linkage-disequilibrium

Calculate linkage disequilibrium statistics (r², D'), perform LD pruning for population structure analysis, identify haplotype blocks, and visualize LD patterns using PLINK, scikit-allel, and LDBlockS

by GPTomics· Repository·data
Run in AgentAreaBrowse All Skills
Also installable via skills CLI
npx skills add GPTomics/bioSkills/data/linkage-disequilibrium

Source

Repo:github.com/GPTomics/bioSkills
Path:data/linkage-disequilibrium(main)

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linkage-disequilibrium | AgentArea Skills