spatial-deconvolution

Estimate cell type composition in spatial transcriptomics spots using reference-based deconvolution. Use cell2location, RCTD, SPOTlight, or Tangram to infer cell type proportions from scRNA-seq refere

by GPTomics· Repository·data

Run in AgentArea Browse All Skills

Also installable via skills CLI

npx skills add GPTomics/bioSkills/data/spatial-deconvolution

Source

Repo:github.com/GPTomics/bioSkills

Path:data/spatial-deconvolution(main)

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