loop-calling

Detect chromatin loops and point interactions from Hi-C data using cooltools, chromosight, and HiCCUPS-like methods. Identify CTCF-mediated loops and enhancer-promoter contacts. Use when detecting chr

by GPTomics· Repository·data

Run in AgentArea Browse All Skills

Also installable via skills CLI

npx skills add GPTomics/bioSkills/hi-c-analysis/loop-calling

Source

Repo:github.com/GPTomics/bioSkills

Path:hi-c-analysis/loop-calling/SKILL.md(main)

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